Shariat, Nikki

Nikki Shariat
Assistant Professor
Microbiology
Molecular epidemiology of bacterial pathogens using metagenomics; ecology of Salmonella serovars in host animals and environments.
Molecular epidemiology of bacterial pathogens using metagenomics; ecology of Salmonella serovars in host animals and environments.
Lipidomic and metabolomic analyses of antimicrobial resistant pathogens using ion mobility and mass spectrometry
Environmental microbiology, microbial ecology, marine systems, water quality and public health, disease ecology
Molecular mechanisms of plant immune action and bacterial pathogen virulence in model and crop pathosystems. Tool/technique development for phytopathogenesis systems biology and translational research.
Fermentation and biotechnology with emphasis on microbial processes to generate fuels and chemicals; nutrient-limited processes; central metabolism and the effect of redox constraints.
We use the easy genetic system of a soil bacterium, Acinetobacter baylyi ADP1,to study diverse aspects of gene expression and chromosomal rearrangements.This research has implications for medical issues (gene amplification), environmental issues (bioremediation), biotechnology/bioenergy (conversion of lignin to biofuels), and evolution (new methods for experimental evolution).
Interactions between microbial pathogens and host immunity in the mouse model using bacteria that naturally infect mice and closely related strains that are important human pathogens.
Human fungal pathogens, sexual reproduction and development in fungal pathogenesis
Microbial glycobiology lab characterizing bacterial glycoconjugate pathways, bacteriophage interactions with their hosts, and benefits of human milk oligosaccharides to develop novel vaccines and therapeutics for the prevention of diarrheal diseases and post-infectious neuropathies such as Guillain-Barré Syndrome.